GrippeCanadaV3, Main, Exploration, bibRecord, 000370

Detection of influenza C virus by a real-time RT-PCR assay.

Identifieur interne : 000370 ( Main/Exploration ); précédent : 000369; suivant : 000371

Detection of influenza C virus by a real-time RT-PCR assay.

Auteurs : Kanti Pabbaraju [Canada] ; Sallene Wong ; Anita Wong ; Jennifer May-Hadford ; Raymond Tellier ; Kevin Fonseca

Source :

Influenza and other respiratory viruses [ 1750-2659 ] ; 2013.

RBID : pubmed:23445084

Descripteurs français

KwdFr :
- Adolescent, Adulte, Adulte d'âge moyen, Alberta, Canada, Enfant, Enfant d'âge préscolaire, Grippe humaine (diagnostic), Grippe humaine (virologie), Humains, Influenzavirus C (isolement et purification), Jeune adulte, Mâle, Nourrisson, Nouveau-né, RT-PCR (), Réaction de polymérisation en chaine en temps réel (), Sensibilité et spécificité, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire (), Virologie ().
MESH :
- diagnostic : Grippe humaine.
- isolement et purification : Influenzavirus C.
- virologie : Grippe humaine.
- Adolescent, Adulte, Adulte d'âge moyen, Alberta, Canada, Enfant, Enfant d'âge préscolaire, Humains, Jeune adulte, Mâle, Nourrisson, Nouveau-né, RT-PCR, Réaction de polymérisation en chaine en temps réel, Sensibilité et spécificité, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire, Virologie.
Wicri :
- geographic : Canada.

English descriptors

KwdEn :
- Adolescent, Adult, Aged, Aged, 80 and over, Alberta, Canada, Child, Child, Preschool, Humans, Infant, Infant, Newborn, Influenza, Human (diagnosis), Influenza, Human (virology), Influenzavirus C (isolation & purification), Male, Middle Aged, Molecular Diagnostic Techniques (methods), Real-Time Polymerase Chain Reaction (methods), Reverse Transcriptase Polymerase Chain Reaction (methods), Sensitivity and Specificity, Virology (methods), Young Adult.
MESH :
- geographic : Alberta, Canada.
- diagnosis : Influenza, Human.
- isolation & purification : Influenzavirus C.
- methods : Molecular Diagnostic Techniques, Real-Time Polymerase Chain Reaction, Reverse Transcriptase Polymerase Chain Reaction, Virology.
- virology : Influenza, Human.
- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Humans, Infant, Infant, Newborn, Male, Middle Aged, Sensitivity and Specificity, Young Adult.

Abstract

BACKGROUND

Influenza C virus can cause both upper and lower respiratory tract infections and has been reported to be prevalent in children. However, these infections have been under-diagnosed, and epidemiological data available are limited due to the lack of convenient detection assays.

OBJECTIVE

Design and validate a real-time reverse-transcriptase PCR (rt RT-PCR) assay for the detection of influenza C.

STUDY DESIGN

Respiratory samples from two primary settings, namely, children who were hospitalized or seen in the emergency department, and respiratory outbreaks for which no other viral etiology was found were used for the detection of influenza C.

RESULTS AND CONCLUSIONS

The assay was sensitive and specific for the detection of influenza C. Eleven of 474 (2·32%) patients, all less than 10 years of age, were positive for influenza C. The strains clustered into two lineages, namely C/Kanagawa and C/Sao Paulo, based upon sequencing of the hemagglutinin-esterase gene. Epidemiological data showed that a higher proportion of influenza C infections occur in younger children and during the winter months. This is the first report of the detection of influenza C in Alberta, Canada, and suggests that the detection of this virus should be included in respiratory virus testing panels.

DOI: 10.1111/irv.12099
PubMed: 23445084

Affiliations:

Canada

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000377
to stream Main, to step Curation: 000377

Le document en format XML

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<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
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<p>Influenza C virus can cause both upper and lower respiratory tract infections and has been reported to be prevalent in children. However, these infections have been under-diagnosed, and epidemiological data available are limited due to the lack of convenient detection assays.</p>
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<div type="abstract" xml:lang="en"><p><b>OBJECTIVE</b>
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<p>Design and validate a real-time reverse-transcriptase PCR (rt RT-PCR) assay for the detection of influenza C.</p>
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<div type="abstract" xml:lang="en"><p><b>STUDY DESIGN</b>
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<p>Respiratory samples from two primary settings, namely, children who were hospitalized or seen in the emergency department, and respiratory outbreaks for which no other viral etiology was found were used for the detection of influenza C.</p>
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<div type="abstract" xml:lang="en"><p><b>RESULTS AND CONCLUSIONS</b>
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<p>The assay was sensitive and specific for the detection of influenza C. Eleven of 474 (2·32%) patients, all less than 10 years of age, were positive for influenza C. The strains clustered into two lineages, namely C/Kanagawa and C/Sao Paulo, based upon sequencing of the hemagglutinin-esterase gene. Epidemiological data showed that a higher proportion of influenza C infections occur in younger children and during the winter months. This is the first report of the detection of influenza C in Alberta, Canada, and suggests that the detection of this virus should be included in respiratory virus testing panels.</p>
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Detection of influenza C virus by a real-time RT-PCR assay.

Detection of influenza C virus by a real-time RT-PCR assay.

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